Home My Page Projects Code Snippets Project Openings KI-S
Summary Activity SCM

Project description

Help tool to calculate shared K-mers and ANI between genomic sequences.
Shared K-mers is a good estimate of the phylogenetic distance between closely related genomic sequences.
Shared K-mers allows very fast taxonomic assignement.
Tools to generate representations of similarity matrix.
Circle packing representation improves visualization of large similarity matrix.

Project Information

Tags: systematics, taxonomy, comparative genomics, k-mers

This project has not yet categorized itself in the Trove Software Map

Registered: 2018-01-12 15:22

Public Tools
SCM Repository (Git: 5 updates, 3 adds)
Project Members
Click to toggle
[8] Uninitialized string offset: 0 (/opt/gforge/common/include/gettext.php at 67)
[8] Uninitialized string offset: 1 (/opt/gforge/common/include/gettext.php at 67)