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authorSébastien Picault <sebastien.picault@inra.fr>
Wed, 20 Feb 2019 07:38:09 +0000 (08:38 +0100)
committerSébastien Picault <sebastien.picault@inra.fr>
Wed, 20 Feb 2019 07:38:09 +0000 (08:38 +0100)
commitc3b7b4fd3a38162936676669f648d6ef11601388
treebd1cc568ddc7cc18fcfba34d5e2fca45bd6693f5
parent76666e353b652d321f56f563875c1bec27bbf91e
Released version 1.0 of EMULSION under license Apache-2.0
284 files changed:
LICENSE [new file with mode: 0644]
NOTICE [new file with mode: 0644]
README.md [new file with mode: 0644]
doc/html/.buildinfo [new file with mode: 0644]
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doc/html/emulsion.model.html [new file with mode: 0644]
doc/html/emulsion.tools.html [new file with mode: 0644]
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doc/html/index.html [new file with mode: 0644]
doc/html/models.tgz [new file with mode: 0644]
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doc/html/pages/Feature_examples.html [new file with mode: 0644]
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doc/html/pages/Information.html [new file with mode: 0644]
doc/html/pages/Install.html [new file with mode: 0644]
doc/html/pages/License.html [new file with mode: 0644]
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doc/html/pages/Modelling_language_basics.html [new file with mode: 0644]
doc/html/pages/Modelling_principles.html [new file with mode: 0644]
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models/features/IBM_SEIRS.yaml [new file with mode: 0644]
models/features/IBM_SIR.yaml [new file with mode: 0644]
models/features/IBM_SIRS_periodic_risk.yaml [new file with mode: 0644]
models/features/IBM_SIR_JA_demo.yaml [new file with mode: 0644]
models/features/IBM_SIR_age_demo.yaml [new file with mode: 0644]
models/features/IBM_SIR_aggreg.yaml [new file with mode: 0644]
models/features/IBM_SIR_demo.yaml [new file with mode: 0644]
models/features/IBM_duration.yaml [new file with mode: 0644]
models/features/IBM_gest.yaml [new file with mode: 0644]
models/features/compart_SEIRS.yaml [new file with mode: 0644]
models/features/compart_SIR.yaml [new file with mode: 0644]
models/features/compart_SIRS_periodic_risk.yaml [new file with mode: 0644]
models/features/compart_SIR_JA_demo.yaml [new file with mode: 0644]
models/features/compart_SIR_demo.yaml [new file with mode: 0644]
models/features/compart_SIR_metapop.yaml [new file with mode: 0644]
models/features/data/moves.csv [new file with mode: 0644]
models/features/hybrid_SEIRS.yaml [new file with mode: 0644]
models/features/hybrid_SIR.yaml [new file with mode: 0644]
models/features/hybrid_SIRS_periodic_risk.yaml [new file with mode: 0644]
models/features/hybrid_SIR_JA_demo.yaml [new file with mode: 0644]
models/features/hybrid_SIR_age_demo.yaml [new file with mode: 0644]
models/features/hybrid_SIR_aggreg.yaml [new file with mode: 0644]
models/features/hybrid_SIR_demo.yaml [new file with mode: 0644]
models/features/hybrid_SIR_metapop.yaml [new file with mode: 0644]
models/features/hybrid_SIR_metapop_data.py [new file with mode: 0644]
models/features/hybrid_SIR_metapop_data.yaml [new file with mode: 0644]
models/features/hybrid_SIR_struct.yaml [new file with mode: 0644]
models/features/hybrid_duration.yaml [new file with mode: 0644]
models/features/hybrid_gest.yaml [new file with mode: 0644]
models/quickstart/quickstart.yaml [new file with mode: 0644]
src/emulsion/__init__.py [new file with mode: 0644]
src/emulsion/__main__.py [new file with mode: 0644]
src/emulsion/agent/__init__.py [new file with mode: 0644]
src/emulsion/agent/action.py [new file with mode: 0644]
src/emulsion/agent/atoms.py [new file with mode: 0644]
src/emulsion/agent/comparts.py [new file with mode: 0644]
src/emulsion/agent/core/__init__.py [new file with mode: 0644]
src/emulsion/agent/core/abstract_agent.py [new file with mode: 0644]
src/emulsion/agent/core/emulsion_agent.py [new file with mode: 0644]
src/emulsion/agent/core/groups.py [new file with mode: 0644]
src/emulsion/agent/exceptions.py [new file with mode: 0644]
src/emulsion/agent/managers/__init__.py [new file with mode: 0644]
src/emulsion/agent/managers/abstract_process_manager.py [new file with mode: 0644]
src/emulsion/agent/managers/compart_process_manager.py [new file with mode: 0644]
src/emulsion/agent/managers/functions.py [new file with mode: 0644]
src/emulsion/agent/managers/group_manager.py [new file with mode: 0644]
src/emulsion/agent/managers/ibm_process_manager.py [new file with mode: 0644]
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src/emulsion/init_emulsion.py [new file with mode: 0755]
src/emulsion/model/__init__.py [new file with mode: 0644]
src/emulsion/model/emulsion_model.py [new file with mode: 0644]
src/emulsion/model/exceptions.py [new file with mode: 0644]
src/emulsion/model/functions.py [new file with mode: 0644]
src/emulsion/model/state_machines.py [new file with mode: 0644]
src/emulsion/resources/emulsion.tx [new file with mode: 0644]
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src/emulsion/tools/__init__.py [new file with mode: 0644]
src/emulsion/tools/calendar.py [new file with mode: 0644]
src/emulsion/tools/functions.py [new file with mode: 0644]
src/emulsion/tools/graph.py [new file with mode: 0644]
src/emulsion/tools/misc.py [new file with mode: 0644]
src/emulsion/tools/parallel.py [new file with mode: 0644]
src/emulsion/tools/plot.py [new file with mode: 0644]
src/emulsion/tools/simulation.py [new file with mode: 0644]
src/emulsion/tools/state.py [new file with mode: 0644]
src/emulsion/tools/timing.py [new file with mode: 0644]
src/emulsion/tools/view.py [new file with mode: 0644]