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index [2015/03/19 12:10]
nicolas.dumoulin@irstea.fr [Work with sources]
index [2016/09/12 11:26]
nicolas.dumoulin@irstea.fr [Work with sources]
Ligne 4: Ligne 4:
   * reading and writing viability kernel in a hdf5 format   * reading and writing viability kernel in a hdf5 format
   * functions for analysing, comparing and viewing viability kernel   * functions for analysing, comparing and viewing viability kernel
 +
 +This project is [[rnsc|supported by the French Network for Complex Systems]].
 +
 +===== HDF5 format =====
 +
 +Motivation: defining a robust, efficient and interoperable file format for storing and exchanging computed kernels.
 +
 +[[https://​en.wikipedia.org/​wiki/​Hierarchical_Data_Format|HDF5]] is designed for storing large amount of data with metadata on each set of data in a same file. It is widely used by high performance scientific applications.
 +
 +  * [[HDF5FormatSpecifications|Draft for the specifications of the HDF5 format]]
 +  * [[hdf5experiments|Experiments on hdf5 formats performance]]
 +
 +As soon as the structure will be fixed, it could be interesting to produce a XDMF file that describe the schema.
  
 ===== Common API ===== ===== Common API =====
Ligne 14: Ligne 27:
   * visualization   * visualization
  
-==== hdf5 IO ====+  * [[APISpecifications|Draft for the specifications of the API]] 
 +  * [[APIPython|Python version]]
  
-As soon as the structure will be fixedit could be interesting to produce ​XDMF file that describe the schema.+===== Community Web Portal ===== 
 + 
 +For building a community and for sharing and comparing easily ​the computed kernel approximations, a website is planned. 
 + 
 +Prototypes:​ 
 +  * [[http://​mann.clermont.cemagref.fr/​syk/​|first moke-up]] (static pages) 
 +  *  [[http://​motive.cemagref.fr/​vino/​sharekernel|python-django application]] (code updated every 5 minutes from vinosite directory) 
 + 
 +[[WebSpecifications|detailed specifications]] are in progress. 
 + 
 + 
 +===== Kernel Examples ===== 
 + 
 +Sample files for making test are available on this [[http://​motive.cemagref.fr/​owncloud/​index.php/​apps/​files/?​dir=%2FVino%2Fsamples|shared storage]] (ask for account). 
 + 
 +  * Lake (2D) 
 +    * analytical solution available in python on the git repository 
 +  * Languages (3D)
  
 ===== Work with sources ===== ===== Work with sources =====
  
-You can retrieve the sources with git: <​code>​git clone ssh://git@git.cru.fr:2222/​vino</​code>​+You can retrieve the sources with git: <​code>​git clone git://git.renater.fr/vino.git</​code>​ 
 + 
 +Or [[https://​sourcesup.renater.fr/​scm/​browser.php?​group_id=1730|browse it here]] or on [[https://​github.com/​NicolasDumoulin/​vino|github]].
  
 +[[https://​sourcesup.renater.fr/​pm/​task.php?​group_id=1730&​group_project_id=2926|You can browse current issues or submit a new one]].
 ==== Joining the developers team ==== ==== Joining the developers team ====
  
 You have to init your account by logging a first time on sourcesup (if not yet done) and ask to managers to add your account into the project. You have to init your account by logging a first time on sourcesup (if not yet done) and ask to managers to add your account into the project.
  
-Then, you have to upload your SSH public key on the [[https://​sourcesup.renater.fr/​scm/?​group_id=1730|Git]] ​page.+Then, you have to upload your SSH public key on your account configuration ​page ("Edit keys" section at bottom).
index.txt · Dernière modification: 2021/05/17 10:59 par simon.murail@iscpif.fr